STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ44995.1Glucokinase. (317 aa)    
Predicted Functional Partners:
SDZ02171.1
Polyphosphate glucokinase.
  
  
 0.929
SDY42642.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
  
 
0.924
SDZ10961.1
Glucokinase.
  
  
 
0.923
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.902
SDY67392.1
Phosphoglucomutase.
     
 0.897
SDZ05179.1
Transketolase; Belongs to the transketolase family.
   
 
 0.895
SDZ05143.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.892
SDZ07203.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
    
  0.892
SDZ51121.1
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase.
     
 0.890
SDZ16953.1
Fructose-bisphosphate aldolase.
    
  0.814
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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