STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ47849.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)    
Predicted Functional Partners:
SDZ03137.1
3-hydroxyacyl-CoA dehydrogenase.
 0.999
SDY82184.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.984
SDZ24852.1
3-hydroxybutyryl-CoA dehydrogenase/5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate dehydrogenase.
 0.975
SDZ47860.1
3-oxoadipate CoA-transferase beta subunit.
 
 
 0.951
SDZ54785.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.949
SDZ47873.1
3-oxoadipate CoA-transferase alpha subunit.
 
 
 0.947
SDZ48794.1
Hypothetical protein.
  
 0.910
SDZ47784.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.905
SDY82216.1
enoyl-CoA hydratase.
 
 0.902
SDZ54703.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.899
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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