STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ48131.1Ferredoxin; Manually curated. (68 aa)    
Predicted Functional Partners:
SDZ48151.1
Nocardicin N-oxygenase; Belongs to the cytochrome P450 family.
 
  
 0.937
SDZ48142.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.932
SDZ51199.1
Phosphotransacetylase.
    
 0.879
SDZ48161.1
Htaa protein.
       0.775
SDZ48123.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase/L-iditol 2-dehydrogenase.
       0.773
SDY38792.1
Assimilatory nitrate reductase (NADH) beta subunit.
    
 0.714
SDZ08659.1
Reductase C-terminal.
    
 0.714
SDZ42085.1
Ferredoxin-NADP reductase.
  
  
 0.518
SDY44171.1
Chloramphenicol-sensitive protein RarD.
    
 0.510
SDZ27316.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.431
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.