STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ50604.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (313 aa)    
Predicted Functional Partners:
SDZ50611.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.973
SDZ50598.1
Multiple sugar transport system substrate-binding protein.
 
  0.959
SDZ26163.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.905
SDY77416.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.902
SDY40691.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.897
SDY52530.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.897
SDY53404.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.897
SDZ30778.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.895
SDZ50616.1
Hypothetical protein.
 
     0.894
SDY47362.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.893
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.