STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ52460.1Monosaccharide ABC transporter substrate-binding protein, CUT2 family. (328 aa)    
Predicted Functional Partners:
SDZ52478.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.961
SDZ52449.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  
 
0.922
SDZ52471.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.894
SDZ57088.1
Ribose transport system substrate-binding protein.
  
  
  0.852
SDZ15050.1
Ribose transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.844
SDY87130.1
Ribose transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.815
SDZ15068.1
Ribose transport system substrate-binding protein.
  
  
  0.807
SDY57946.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
  0.804
SDZ15082.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
  0.804
SDZ57076.1
Ribose transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.791
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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