STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A0033Short chain dehydrogenase. (260 aa)    
Predicted Functional Partners:
h16_A0032
Prokaryotic protein of unknown function,predicted cytosolic protein.
 
    0.697
h16_A0258
Short chain dehydrogenase.
  
     0.582
h16_A0034
Transcriptional regulator, GntR-family.
     
 0.552
h16_A0031
MFS transporter, ACS family; 11 TMHs.
  
  
 0.461
fabD
(Acyl-carrier-protein) S-malonyltransferase.
 
 
 0.460
h16_B1279
Two domain protein: Cytochrome P450.
 
 
 0.454
h16_B0016
Putative beta-mannosidase.
  
  
 0.452
h16_B0646
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.440
h16_A1602
Arylsulfatase A or related enzyme.
   
 
 0.434
h16_B0315
Arylsulfatase.
   
 
 0.434
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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