STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A0071Transcriptional regulator, GntR-family. (252 aa)    
Predicted Functional Partners:
h16_A0072
2-Keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
 
  
 0.792
h16_A1320
Transcriptional regulator, GntR-family.
 
  
 0.790
h16_A0034
Transcriptional regulator, GntR-family.
  
     0.774
h16_B1718
Transcriptional regulator, GntR-family.
  
     0.774
h16_A3387
Transcriptional regulator, GntR-family.
 
  
 0.773
h16_B0285
Transcriptional regulator, GntR-family.
  
     0.771
h16_B2456
Transcriptional regulator, GntR-family.
  
     0.770
h16_A3591
Transcriptional regulator, GntR-family.
  
     0.768
h16_B1036
Transcriptional regulator, GntR-family.
  
     0.767
h16_A1008
Transcriptional regulator, GntR-family.
  
     0.766
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.