STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A0275Transcriptional regulator, AraC-family. (325 aa)    
Predicted Functional Partners:
h16_A1853
Transcriptional regulator, AraC-family.
 
 
 0.811
h16_A1775
Transcriptional regulator, AraC-family.
 
 
 0.685
h16_B1895
Transcriptional regulator, AraC-family.
 
 
 0.680
h16_B0327
Transcriptional regulator, AraC-family.
 
 
 0.646
h16_B0427
Transcriptional regulator, AraC-family.
 
 
 0.538
h16_A0276
Transporter, MFS superfamily; 12 TMHs.
       0.531
h16_A1803
Transcriptional regulator, AraC-family.
 
 
 0.481
pobR
Transcriptional regulator, AraC-family.
 
 
 0.480
h16_B1476
Putative transcriptional regulator.
 
 
 0.457
h16_B1733
Transcriptional regulator, AraC-family.
 
 
 0.443
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.