STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A1145Flavin-binding monooxygenase. (522 aa)    
Predicted Functional Partners:
h16_A1144
Predicted hydrolases or acyltransferases.
 
 
 0.928
h16_A3741
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.870
h16_A1143
Uncharacterized protein involved in ubiquinone biosynthesis.
 
   
 0.799
h16_A1146
Transcriptional regulator, TetR family.
 
     0.699
h16_B1249
Esterase/lipase.
  
 0.664
h16_A3217
Hypothetical membrane associated protein.
  
     0.600
h16_B1743
Cytochrome P450.
 
 
 0.598
h16_A3743
Predicted metal-dependent hydrolase.
 
     0.586
h16_A0876
Secretory lipase.
 
  
 0.550
h16_B0224
Conserved hypothetical protein.
  
    0.523
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.