Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
h16_A1663Transcriptional regulator, MarR-family. (152 aa)    
Predicted Functional Partners:
h16_A2295
Transcriptional regulator, MarR-family.
  
     0.763
h16_A1662
Hypothetical protein.
       0.705
ohr
Organic hydroperoxide resistance protein.
  
 0.582
h16_A1665
Predicted redox protein, regulator of disulfide-bond formation.
 
  
 0.571
h16_A1664
Conserved hypothetical protein.
       0.460
h16_A1588
ABC-type transporter, fused periplasmic and permease components; 5 TMHs.
  
  
 0.442
h16_B1803
Predicted redox protein regulator of disulfide-bond formation.
 
  
 0.401
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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