STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A1702FAD binding domain in molybdopterin dehydrogenase. (271 aa)    
Predicted Functional Partners:
coxS3
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 0.996
coxL3
Aerobic-type carbon monoxide dehydrogenase homolog, subunits L and G.
 
 0.996
h16_A1700
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
  
 0.984
coxL1
Aerobic-type carbon monoxide dehydrogenase homolog, large subunit.
 
 
 0.875
qorL1
Putative quinoline 2-oxidoreductase, large subunit.
 
 
 0.875
qorL2
Putative quinoline 2-oxidoreductase, large subunit.
 
 
 0.875
coxS1
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 
 0.873
hcrC
4-Hydroxybenzoyl-CoA reductase, 2Fe-2S iron-sulfur cluster subunit C.
 
 0.872
coxS4
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 
 0.869
h16_B0817
Aerobic-type carbon monoxide dehydrogenase homolog subunits S and G.
 
 0.869
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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