STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A1856EPS I polysaccharide export outer membrane protein epsA precursor/Periplasmic protein involved in p. (400 aa)    
Predicted Functional Partners:
h16_B0012
EPS I polysaccharide export protein, putative tyrosine-protein kinase.
 
 
 0.993
h16_A1857
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.948
h16_A1855
Sugar transferase involved in lipopolysaccharidesynthesis.
 
  
 0.917
wza
Exopolysaccharide export protein.
  
  
 
0.908
wzc
Protein tyrosin kinase involved in exopolysaccharide biosynthesis.
 
 
 0.866
h16_B0036
Putative exopolysaccharide biosynthesis protein.
 
 
 0.866
manC1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.786
tagG
ABC-type transporter, permease component; 6 TMHs.
  
  
 0.756
h16_B0038
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.723
h16_A1859
Hypothetical membrane spanning protein.
  
  
 0.692
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.