STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2020Response regulator, NarL-family; REC (residues 4 to 118, 2e-21) with a complete phosphorylation pocket (DD-D50-T77-K98). (215 aa)    
Predicted Functional Partners:
h16_A0780
Signal transduction histidine kinase containing PAS/PAC sensor domain.
 
 0.875
h16_A2136
Signal transduction histidine kinase.
 
 
 0.868
h16_A0155
Signal transduction histidine kinase containing a CHASE3 sensory domain; 2 TMHs.
 
 
 0.867
h16_A1985
Signal transduction histidine kinase containing PAS/PAC sensor domain; 2 TMHs.
 
 
 0.866
h16_B2298
Signal transduction histidine kinase; 5 TMHs.
 
 
 0.852
h16_B0622
Signal transduction histidine kinase; 7 TMHs.
 
 
 0.845
h16_A3709
Signal transduction histidine kinase.
   
 0.778
h16_A3043
Response regulator, NarL-family; REC (residues 8 to 123, 8e-14) with a complete phosphorylation pocket (DD-D61-S93-K112).
  
     0.774
narX2
Signal transduction histidine kinase,nitrate/nitrite-specific; 2 TMHs.
 
 
 0.643
h16_B2086
Response regulator-like LuxR-type HTH DNA-binding protein.
  
     0.601
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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