STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2501ABC-type sugar transport systems, permease component: CUT1 family; 6 TMHs. (294 aa)    
Predicted Functional Partners:
h16_A2500
ABC-type transporter, permease component: CUT1 family; 6 TMHs.
 0.998
h16_A2502
ABC-type transporter, ATPase component: CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.998
h16_A2503
ABC-type transporter, ATPase component: CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.998
h16_A2498
ABC-type sugar transporter, periplasmic component.
 
 0.992
h16_A2499
Predicted small integral membrane protein; 3 TMHs.
 
    0.930
h16_A2327
ABC-type transporter, ATPase component: CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.929
h16_A2328
ABC-type transporter, permease component: CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.899
h16_A2504
Transcriptional regulator, DeoR-family.
 
   
 0.807
h16_A2330
ABC-type transporter, periplasmic component: CUT1 family.
 
 
 0.787
h16_B2051
Conserved hypothetical protein.
  
 
 0.662
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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