STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2680Hypothetical membrane associated protein. (161 aa)    
Predicted Functional Partners:
h16_A2685
Parvulin-like peptidyl-prolyl isomerase.
 
   
 0.723
h16_B2350
Signal transduction histidine kinase containing a receiver domain (hybrid); REC (residues548 to 660, 2e-19) with a complete phosphorylation pocket (DD-D53-S88-K98).
   
 
 0.715
h16_A2687
FOG: FHA domain protein.
  
   
 0.697
emrA
Putative drug or toxin secretion protein.
  
     0.625
sunT
ABC-type protein transporter, ATPase, permease and peptidase components: Prot1E family; 7 TMHs.
 
     0.569
h16_B0273
Predicted DNA-binding protein with PD1-like DNA-binding motif.
  
     0.567
h16_B1541
Signal transduction histidine kinase containing a receiver domain (hybrid) and PAS sensor domains; REC (residues546 to 659, 4e-19) with a complete phosphorylation pocket (DD-D55-T88-K98).
  
 
 0.530
h16_A0780
Signal transduction histidine kinase containing PAS/PAC sensor domain.
  
 
 0.513
h16_B2453
Protoporphyrinogen oxidase.
  
     0.486
h16_A0155
Signal transduction histidine kinase containing a CHASE3 sensory domain; 2 TMHs.
  
  
 0.433
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.