STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2757ABC-type transporter, periplasmic component: PAAT family. (264 aa)    
Predicted Functional Partners:
h16_A2754
ABC-type transporter, permease component: PAAT family; 5 TMHs.
 0.992
h16_A2755
ABC-type transporter, permease component: PAAT family; 5 TMHs.
 0.992
h16_A2756
ABC-type transporter, ATPase component: PAAT family.
  
 0.990
h16_B1809
ABC-type transporter, permease component: PAAT family; 3 TMHs.
 
 0.875
h16_B1808
ABC-type transporter, permease component; 3 TMHs.
 
 0.873
h16_B1810
ABC-type transporter, ATPase component: PAAT family.
 
 0.861
hisP
ABC-type transporter, ATPase component: PAAT family.
 
 0.856
h16_B2489
ABC-type transporter, permease component.
 
 
 0.856
h16_B2488
ABC-type transporter, permease component; 4 TMHs.
 
 
 0.855
hisM
ABC-type transporter, permease component: PAAT family; 4 TMHs.
 
 0.854
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.