STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2980Probable extra-cytoplasmic solute receptor. (337 aa)    
Predicted Functional Partners:
h16_A2775
Hypothetical membrane spanning protein.
 
  
 0.818
h16_B2053
Conserved hypothetical membrane protein.
 
  
 0.817
h16_A3720
Putative component of transporter, tripartite tricarboxylate transport (TTT) family.
 
  
 0.702
h16_B2054
4 TMHs; putative transporter, APC superfamily.
 
  
 0.680
h16_A2978
Acyl-CoA synthetase.
 
     0.678
h16_A2774
Putative transporter, APC superfamily; 4 TMHs.
 
  
 0.671
h16_A2979
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.634
mcd
Malonyl-CoA decarboxylase Malonyl-CoA decarboxylase.
  
    0.488
h16_A3719
Putative component of transporter, tripartite tricarboxylate transport (TTT) family; Signal peptide; transmembrane.
 
  
 0.437
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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