STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A3073Hydantoin racemase. (247 aa)    
Predicted Functional Partners:
h16_A3075
D-Hydantoinase.
 
   
 0.813
h16_A3074
Amidotransferase subunit A.
 
     0.808
h16_A3076
MFS transporter, MHS family; 12 TMHs.
       0.665
h16_A0069
Maleate cis-trans isomerase.
 
     0.616
h16_B2484
Transcriptional regulator, GntR-family.
 
     0.615
h16_B2481
APC transporter, NCS1 family; 12 TMHs.
 
     0.592
h16_A3072
Transcriptional regulator, GntR-family.
 
     0.527
h16_B0878
Transcriptional regulator, GntR-family.
 
     0.515
h16_A3591
Transcriptional regulator, GntR-family.
 
     0.493
h16_A0068
D-Hydantoinase.
 
   
 0.486
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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