STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tupBABC-type transporter, periplasmic component: SulT family. (232 aa)    
Predicted Functional Partners:
h16_A1019
ABC-type transporter, periplasmic component: SulT family.
 
  
 0.971
h16_A3086
ABC-type transporter, ATPase component.
  
  0.968
modA
ABC-type transporter, periplasmic component: MolT family.
 
   
 0.882
h16_A1020
Periplasmic molybdate-binding protein/domain.
 
  
 0.826
panB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
  
    0.788
fdhD1
Protein required for formate dehydrogenase activity; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.765
fdsR
Transcriptional regulator of formate dehydrogenase operon.
 
  
 0.753
torD
Formate dehydrogenase-specific chaperone.
 
    0.746
fdhA1
Formate dehydrogenase alpha subunit (Fe4S4 domain); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.739
fdhB1
Formate dehydrogenase iron-sulfur subunit; HybA.
 
   
 0.732
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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