STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A3092Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
h16_A3093
Acetyltransferase.
     
 0.751
dld
D-Lactate dehydrogenase (Cytochrome).
       0.737
h16_B2469
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.731
h16_B0763
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.664
h16_B1414
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.658
h16_B1849
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.631
h16_A1578
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.598
h16_B0436
Transcriptional regulator, LysR-family.
  
     0.546
h16_B1922
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.447
h16_A0769
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.436
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.