STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspFGeneral secretion pathway protein F. (405 aa)    
Predicted Functional Partners:
gspE
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.987
gspD
General secretion pathway protein D.
 
  
 0.958
pilB
Type IV pilus assembly protein PilB.
 
 0.956
gspG
General secretion pathway protein G; Pseudopilin PulG/GspG.
 
  
 0.949
gspI
General secretion pathway protein I.
 
  
 0.903
pilD
Type IV pilus prepilin leader peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.900
gspH
General secretion pathway protein H.
 
  
 0.864
pilT
Type IV pilus twitching motility protein PilT.
 
  
 0.831
pilU
Type IV pilus twitching motility protein PilU.
 
   
 0.813
pilA
Type IV pilus structural subunit PilA; Belongs to the N-Me-Phe pilin family.
 
  
 0.795
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.