STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copZCopper chaperone, heavy metal ion binding. (66 aa)    
Predicted Functional Partners:
copP2
Putative copper uptake P-type ATPase; 7 TMHs.
 
 
 0.946
h16_B1110
Copper-Zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.931
zntA
Putative heavy metal transporting P-type ATPase; 9 TMHs.
  
 
 0.850
cadA
Putative heavy metal efflux P-type ATPase; 5 TMHs.
 
 
 0.800
cueR
Transcriptional regulator, MerR-family.
 
  
 0.784
copP1
Putative copper uptake P-type ATPase; 8 TMHs.
  
 
 0.777
silP
Putative silver efflux P-type ATPase; 5 TMHs.
  
 
 0.774
copF
Copper efflux P-type ATPase; 8 TMHs.
  
 
 0.764
rplN
LSU ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.598
trxB2
Thioredoxin reductase.
 
  
 0.558
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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