STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0122Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
pcaQ
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.661
h16_B0300
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.623
h16_A0769
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.619
h16_A3192
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.596
h16_B0489
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.596
h16_B1816
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.596
h16_A1587
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.595
h16_B0481
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.588
h16_B0169
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.584
h16_A3224
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.570
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.