STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0137Conserved hypothetical membrane protein; 14 TMHs. (535 aa)    
Predicted Functional Partners:
h16_B0133
Conserved hypothetical protein.
 
     0.828
aroM
AroM protein.
 
     0.786
h16_A2301
Protein of unknown function.
 
     0.783
h16_B0138
Transcriptional regulator, IclR-family.
 
     0.725
h16_B0136
Cysteine desulfurase.
 
     0.678
pepE2
Peptidase E; Belongs to the peptidase S51 family.
 
     0.634
atpB
Membrane-bound ATP synthase, F0 sector,subunita; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
   
    0.440
h16_A2299
Transcriptional regulator, IclR-family.
 
     0.422
h16_A2050
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
    0.416
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.