STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0485Acyl-CoA dehydrogenase, short-chain specific. (400 aa)    
Predicted Functional Partners:
h16_A0142
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.946
h16_A1889
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.943
h16_A3307
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.943
h16_B0657
Enoyl-CoA hydratase/carnithine racemase.
  
 0.943
h16_B0659
Enoyl-CoA hydratase/carnithine racemase.
  
 0.943
h16_B1333
Predicted aminoglycoside phosphotransferase.
 
 
 0.908
h16_B2555
Acyl-CoA dehydrogenase, short-chain specific.
  
  
 
0.904
h16_B1371
Acyl-CoA dehydrogenase, short-chain specific.
  
  
 
0.903
h16_A1268
Predicted aminoglycoside phosphotransferase.
 
 
 0.902
h16_A1099
Predicted aminoglycoside phosphotransferase.
 
 
 0.877
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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