STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0525Uncharacterized conserved protein; Function unknown. (458 aa)    
Predicted Functional Partners:
h16_A1601
Conserved hypothetical protein.
 
     0.752
h16_A1602
Arylsulfatase A or related enzyme.
 
     0.743
h16_A1597
Conserved hypothetical protein.
 
     0.714
h16_A1595
Protein involved in meta-pathway of phenol degradation.
 
     0.540
h16_B0315
Arylsulfatase.
 
     0.537
h16_A1600
Uncharacterized conserved protein; Function unknown.
 
     0.485
h16_A3671
Alkyl sulfatase.
 
     0.463
h16_B0523
Response regulator, NarL-family; REC (residues 25 to 139, 1e-11) with a complete phosphorylation pocket (DD-D56-S78-K99).
       0.456
h16_B0524
Signal transduction histidine kinase containing a receiver domain (hybrid); REC (residues481 to 594, 2e-11) with a complete phosphorylation pocket (DD-D49-S82-K97).
       0.456
h16_B1226
Mechano-sensitive channel; Several transmembrane helices (TMpred).
  
     0.444
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.