STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0526Glyoxalase family protein. (121 aa)    
Predicted Functional Partners:
h16_A3549
Spermidine N1-acetyltransferase.
      0.618
h16_B0527
ABC-type transporter, periplasmic component: TauT family.
       0.525
h16_B1364
Transcriptional regulator, PAAX-family.
  
    0.457
h16_A1649
3-Demethylubiquinone-9 3-methyltransferase.
 
  
 0.455
h16_A0274
Lactoylglutathione lyase.
 
  
 0.440
h16_B0885
Conserved hypothetical protein; Function unknown.
 
     0.435
cstA
Carbon starvation protein A; 15 TMHs.
  
    0.421
h16_A2347
NAD-dependent protein deacetylase, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.405
h16_B2540
NAD-dependent protein deacetylase SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
    0.405
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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