STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrC8Cation/multidrug efflux system outer membrane porin. (413 aa)    
Predicted Functional Partners:
acrA8
Cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.909
acrB8
Cation/multidrug efflux pump; 10 TMHs; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.900
acrA10
Cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.809
czcA2
Cobalt-zinc-cadmium resistance membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.786
czcB2
Cobalt-zinc-cadmium resistance efflux pump; 11 TMHs; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.781
acrB10
Cation/multidrug efflux pump; 10 TMHs; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.769
czcA1
Cobalt-zinc-cadmium resistance membrane-fusion protein; 1 TMHs; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.742
acrC1
Cation/multidrug efflux system outer membrane porin.
  
     0.683
acrC9
Cation/multidrug efflux system outer membrane porin.
  
     0.680
acrC4
Cation/multidrug efflux system outer membrane porin.
  
     0.676
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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