STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0599Oxidoreductase short-chain dehydrogenase/reductase family. (268 aa)    
Predicted Functional Partners:
bphD
2,6-dioxo-6-phenylhexa-3-enoate hydrolase.
 
 
 0.864
h16_B0602
Steroid delta-isomerase.
 
     0.851
h16_B0665
Acyl-CoA dehydrogenase.
 
  0.817
h16_B0656
Acyl CoA:acetate/3-ketoacid CoA transferase,beta subunit.
 
 
 0.814
h16_B0660
Acyl-CoA dehydrogenase.
 
  0.812
h16_B0638
Acyl-CoA dehydrogenase, short-chain specific.
 
  0.809
bphC
Biphenyl-2,3-diol 1,2-dioxygenase.
 
 
 0.806
h16_B0661
Acyl-CoA dehydrogenase.
 
  0.796
h16_B0629
Conserved hypothetical protein.
  
 
 0.786
h16_B0655
Acyl CoA:acetate/3-ketoacid CoA transferase,alpha subunit.
 
  
 0.785
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.