STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0633Esterase/lipase. (318 aa)    
Predicted Functional Partners:
h16_A3740
Cyclohexanone monooxygenase.
  
 0.931
h16_B0632
Two domain protein: GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family.
  
    0.787
fdwB
Tungsten-containing formate dehydrogenase beta subunit.
   
 
 0.771
h16_B2100
Two domain protein: Acyl-CoA synthetase (AMP-forming) and acytransferase.
  
 
 0.771
h16_B0634
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.685
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
     
 0.652
nuoG
NADH dehydrogenase chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.631
h16_B1746
Monooxygenase.
  
 0.574
qcrA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit (Rieske Fe-S protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.570
pobR
Transcriptional regulator, AraC-family.
  
  
 0.438
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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