STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B0722Acyl-CoA dehydrogenase. (394 aa)    
Predicted Functional Partners:
h16_B0664
Acyl-CoA dehydrogenase.
 
     0.971
h16_B0721
Acyl-CoA dehydrogenase.
   
0.955
h16_B0396
Acyl-CoA dehydrogenase.
 
     0.954
h16_A1526
Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase.
 
 0.910
gcdH
Glutaryl-CoA dehydrogenase.
  
  
 
0.905
h16_A0461
Two domain protein: 3-hydroxyacyl-CoA dehydrogenase.
  
 0.880
h16_B0380
Acetyl-CoA acetyltransferase.
  
  0.876
h16_A1068
Acyl-CoA dehydrogenase.
 
     0.874
h16_A1528
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.853
pimD
Pimeloyl-CoA dehydrogenase (small subunit).
 
     0.851
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.