STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1039Probable tonB-dependent receptor yncD precursor. (813 aa)    
Predicted Functional Partners:
h16_A2532
TonB-like protein, links inner and outer membranes.
  
 
 0.775
h16_A2830
Hypothetical membrane associated protein.
  
 
 0.775
h16_A3162
Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.775
h16_B1042
Conserved hypothetical protein; PQQ binding motif.
 
  
 0.767
quiA
Quinate dehydrogenase (PQQ); PQQ.
 
    0.723
h16_B0509
Outer membrane receptor, TonB dependent.
 
  
 0.720
h16_B1043
Conserved hypothetical protein; Signal peptide.
 
     0.625
pqqB
Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
 
     0.609
h16_B1046
Zn-dependent hydrolase or glyoxylase.
 
     0.601
h16_B1045
Hypothetical membrane associated protein; Signal peptide.
 
     0.583
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.