STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1148Acyl-CoA synthetase. (544 aa)    
Predicted Functional Partners:
h16_A1526
Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase.
  
 
 0.629
h16_B1147
cNMP regulatory protein; cNMP; HTH_CRP.
  
 
 0.609
fdwB
Tungsten-containing formate dehydrogenase beta subunit.
    
 
 0.604
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
  
 
 0.593
h16_A1197
Acyl-CoA synthetase.
 
 
0.518
h16_A0461
Two domain protein: 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.512
h16_B1279
Two domain protein: Cytochrome P450.
  
 0.495
h16_B1102
Acetyl-CoA synthetase.
 
 
0.485
h16_B1009
Probable bifunctional P-450:NADPH-P450 reductase.
  
 0.477
h16_A1412
Benzoate-coenzyme A ligase.
 
 
0.469
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.