Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
h16_B1237CreA protein; Probable N-terminal signal peptide. (160 aa)    
Predicted Functional Partners:
h16_B1236
Acyl-CoA hydrolase.
       0.752
h16_A0294
Signal transduction histidine kinase.
    
 0.667
h16_A0771
ABC-type transporter, periplasmic component: PAAT family.
  
   
 0.467
hupB3
DNA-binding protein HU family; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.461
h16_A0158
Conserved hypothetical protein.
  
     0.450
h16_A0472
ABC-type transporter, periplasmic component: PAAT family.
  
   
 0.428
h16_A0538
Uncharacterized protein conserved in bacteria.
  
     0.402
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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