STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1332Acyl-CoA dehydrogenase. (521 aa)    
Predicted Functional Partners:
h16_A1519
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.911
h16_A0816
Acyl-CoA dehydrogenase.
  
  
 
0.900
fixB
Electron transfer flavoprotein alpha subunit.
 
 0.789
h16_A0461
Two domain protein: 3-hydroxyacyl-CoA dehydrogenase.
 
 0.750
h16_A1526
Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase.
  
 0.712
fixA
Electron transfer flavoprotein beta-subunit.
 
 
 0.679
fixC
Electron transfer flavoprotein ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.630
h16_A2119
Acyl-CoA-binding protein.
   
 0.527
h16_B1333
Predicted aminoglycoside phosphotransferase.
  
 
 0.521
h16_B1334
Short chain dehydrogenase.
  
  0.498
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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