STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxL6Aerobic-type carbon monoxide dehydrogenase homolog, large subunit. (724 aa)    
Predicted Functional Partners:
coxS6
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 
 0.979
coxS2
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 
 0.911
iorA1
Isoquinoline 1-oxidoreductase, 2Fe-2S-binding subunit A.
 
 0.910
iorA2
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.908
h16_B1379
Hypothetical periplasmic protein.
 
    0.906
h16_A0921
Aerobic-type carbon monoxide dehydrogenase homolog, small subunit.
 
 0.811
coxF2
Xanthine and CO dehydrogenase, maturation factor.
 
  
 0.722
coxF
Xanthine and CO dehydrogenase, maturation factor.
 
  
 0.705
h16_A1591
Membrane-bound alcohol dehydrogenase,cytochromec subunit precursor.
 
  
 0.529
h16_B0817
Aerobic-type carbon monoxide dehydrogenase homolog subunits S and G.
  
 
 0.529
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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