STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1379Hypothetical periplasmic protein. (256 aa)    
Predicted Functional Partners:
coxL6
Aerobic-type carbon monoxide dehydrogenase homolog, large subunit.
 
    0.906
coxS6
Aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit.
 
     0.838
coxL2
Aerobic-type carbon monoxide dehydrogenase homolog, large subunit.
 
    0.617
h16_B2305
Predicted periplasmic or secreted lipoprotein.
  
     0.595
h16_B2340
Conserved hypothetical protein.
  
     0.580
iorB2
Isoquinoline 1-oxidoreductase, beta subunit.
 
    0.579
opt2
Oligopeptide transporter; 13 TMHs.
  
     0.566
iorB1
Isoquinoline 1-oxidoreductase,molybdopterin-binding subunit B.
 
    0.545
h16_B1553
Predicted periplasmic or secreted lipoprotein.
  
     0.536
cyaA
Putative AMP or GMP cyclase containing FHA domain.
       0.465
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.