STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B1739Predicted ferredoxin protein. (67 aa)    
Predicted Functional Partners:
h16_B1740
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
     
 0.640
h16_B1741
Enoyl-CoA hydratase.
     
 0.640
h16_B1738
Enoyl-CoA hydratase/isomerase family; Highest homologies to Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.600
h16_B1743
Cytochrome P450.
  
  
 0.599
h16_B1744
Sulfite reductase alpha subunit (flavoprotein).
     
 0.552
h16_B1279
Two domain protein: Cytochrome P450.
  
  
 0.546
h16_B1742
Enoyl-CoA hydratase/isomerase.
     
 0.487
h16_A2940
Ferredoxin.
     
 0.477
fdwB
Tungsten-containing formate dehydrogenase beta subunit.
     
 0.469
h16_B1737
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
       0.467
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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