STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feaBPutative phenylacetaldehyde dehydrogenase. (486 aa)    
Predicted Functional Partners:
h16_A0291
Coenzyme F390 synthetase.
  
 0.924
paaL1
Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
 0.924
paaL2
Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
 0.924
h16_A1956
Carbon-nitrogen hydrolase.
  
 0.918
maoB
Monoamine oxidase (Flavin containing).
   
 0.907
lao1
L-Amino-acid oxidase.
   
 0.907
h16_A1469
Amidase; Belongs to the amidase family.
   
 0.906
h16_A1732
Amidase; Belongs to the amidase family.
   
 0.906
h16_A3386
Amidase; Belongs to the amidase family.
   
 0.906
h16_B1874
Amidase.
   
 0.906
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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