STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B2134Putative APC transporter; 12 TMHs. (547 aa)    
Predicted Functional Partners:
h16_B1558
Two domain protein: Trehalose synthase.
  
 0.863
h16_B1557
Glycosidase-like protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 0.862
glxb
Glutamine amidotransferases class-II.
 
  
 0.697
glxC
Glutamine amidotransferases class-II.
 
  
 0.629
gltB2
Glutamate synthase [NADPH], Glutamate synthase amidotransferase domain; Belongs to the glutamate synthase family.
 
  
 0.621
h16_B2135
Vanillate O-demethylase oxidoreductase.
     
 0.572
h16_B2190
Transcriptional regulator, XRE-family.
 
  
 0.537
pheA
Prephenate dehydratase, Chorismate mutase.
   
 
 0.530
h16_A1692
Conserved hypothetical protein.
 
   
 0.521
dadA7
D-amino-acid dehydrogenase.
 
  
 0.486
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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