STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauD1Taurine catabolism dioxygenase. (309 aa)    
Predicted Functional Partners:
xsc
Sulphoacetaldehyde acetyltransferase (TPP dependent); Belongs to the TPP enzyme family.
  
 
 0.906
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.905
sseA
Rhodanese-related sulfurtransferase.
    
  0.901
h16_B0860
Sulfite oxidase.
    
  0.900
h16_B2219
ABC-type transporter, periplasmic component.
 
  
 0.847
h16_B0888
ABC-type transporter, periplasmic component: TauT family.
 
 
 0.822
h16_B0889
ABC-type transporter, ATPase component: TauT family; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 
 0.812
h16_B0890
ABC-type transporter, permease component: TauT family; 6 TMHs.
 
 
 0.742
ssuD2
Alkanesulfonate monooxygenase.
 
 
 0.741
ssuE
Predicted flavoprotein.
 
 
 0.740
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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