STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B2247Conserved hypothetical protein; Energy production and conversion. (332 aa)    
Predicted Functional Partners:
h16_B2242
Putative oxidoreductase.
  
 0.966
h16_B2248
Conserved hypothetical protein.
 
    0.960
h16_B2244
ABC-type transporter, periplasmic component: TauT family.
 
  
 0.927
efp1
Translation elongation factor P (EF-P).
  
 0.908
efp2
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.908
h16_B2243
Ferredoxin.
 
     0.907
h16_B2241
Transcriptional regulator, GntR-family.
     0.880
h16_B2245
ABC-type transporter, permease component: TauT family; 6 TMHs.
 
    0.858
h16_B2246
ABC-type transporter, ATPase component: NitT family.
 
  
 0.812
h16_A0485
Iron sulfur cluster assembly protein; Required for insertion of 4Fe-4S clusters.
    
 
 0.653
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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