STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B2464ABC-type transporter, permease component: PepT family; 6 TMHs. (300 aa)    
Predicted Functional Partners:
h16_B1125
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
  
 0.981
h16_A1470
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
  
 0.979
h16_A3295
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
  
 0.978
h16_A1303
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
   
 0.977
h16_A2952
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
  
 0.976
h16_B2463
ABC-type transporter, duplicated ATPase domains:PepT family; Belongs to the ABC transporter superfamily.
   
 0.974
h16_B2465
ABC-type transporter, permease component: PepT family; 3 TMHs.
  
 0.971
dppD3
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
   
 0.967
dppD1
ABC-type transporter, duplicated ATPase domains:PepT family; Belongs to the ABC transporter superfamily.
  
 0.966
h16_A1304
ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
   
 0.963
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.