STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B2504Hypothetical membrane spanning protein; 3 TMHs. (218 aa)    
Predicted Functional Partners:
h16_B2503
Conserved hypothetical protein; Function unknown.
   
 0.992
h16_B2502
ABC-type transporter, periplasmic component.
 
   
 0.926
apbE
Protein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.898
h16_B2500
Sulfite reductase [NADPH] flavoprotein alpha-component.
 
     0.894
h16_B0118
Uncharacterized iron-regulated membrane protein; 8 TMHs.
 
  
 0.562
h16_B1677
Iron regulated protein.
 
  
 0.530
h16_A2653
G:T/U mismatch-specific DNA glycosylase.
  
     0.462
h16_A0319
Hypothetical membrane associated protein.
  
     0.436
h16_B2476
Outer membrane receptor, TonB dependent.
 
  
 0.417
h16_B0893
Conserved hypothetical protein; Signal peptide.
  
     0.414
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.