STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_B25343-Hydroxybutyryl-CoA dehydratase. (258 aa)    
Predicted Functional Partners:
paaH1
3-Hydroxyacyl-CoA dehydrogenase.
 
 0.951
h16_B1652
3-Hydroxyacyl-CoA dehydrogenase.
 0.897
pcaF
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.774
h16_B2533
Probable extra-cytoplasmic solute receptor.
       0.732
paaH2
3-Hydroxyacyl-CoA dehydrogenase.
 
 0.677
h16_B2350
Signal transduction histidine kinase containing a receiver domain (hybrid); REC (residues548 to 660, 2e-19) with a complete phosphorylation pocket (DD-D53-S88-K98).
  
 
 0.657
h16_B0524
Signal transduction histidine kinase containing a receiver domain (hybrid); REC (residues481 to 594, 2e-11) with a complete phosphorylation pocket (DD-D49-S82-K97).
  
 
 0.651
h16_B2532
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
 
 0.614
h16_B0388
3-Hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.601
h16_A0170
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.566
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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