Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK16964.1 | SHK16993.1 | SAMN05444391_0142 | SAMN05444391_0143 | Cytochrome c. | Uncharacterized protein, contains GYD domain. | 0.588 |
SHK16964.1 | SHK17027.1 | SAMN05444391_0142 | SAMN05444391_0144 | Cytochrome c. | Hypothetical protein. | 0.588 |
SHK16964.1 | SHK17061.1 | SAMN05444391_0142 | SAMN05444391_0145 | Cytochrome c. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.588 |
SHK16964.1 | proA | SAMN05444391_0142 | SAMN05444391_0141 | Cytochrome c. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.574 |
SHK16993.1 | SHK16964.1 | SAMN05444391_0143 | SAMN05444391_0142 | Uncharacterized protein, contains GYD domain. | Cytochrome c. | 0.588 |
SHK16993.1 | SHK17027.1 | SAMN05444391_0143 | SAMN05444391_0144 | Uncharacterized protein, contains GYD domain. | Hypothetical protein. | 0.789 |
SHK16993.1 | SHK17061.1 | SAMN05444391_0143 | SAMN05444391_0145 | Uncharacterized protein, contains GYD domain. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.789 |
SHK16993.1 | SHK41741.1 | SAMN05444391_0143 | SAMN05444391_0950 | Uncharacterized protein, contains GYD domain. | Hypothetical protein. | 0.431 |
SHK16993.1 | SHK44394.1 | SAMN05444391_0143 | SAMN05444391_1037 | Uncharacterized protein, contains GYD domain. | Peptide chain release factor subunit 1. | 0.402 |
SHK16993.1 | SHK45736.1 | SAMN05444391_0143 | SAMN05444391_1078 | Uncharacterized protein, contains GYD domain. | Protein of unknown function. | 0.476 |
SHK16993.1 | proA | SAMN05444391_0143 | SAMN05444391_0141 | Uncharacterized protein, contains GYD domain. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.446 |
SHK17027.1 | SHK16964.1 | SAMN05444391_0144 | SAMN05444391_0142 | Hypothetical protein. | Cytochrome c. | 0.588 |
SHK17027.1 | SHK16993.1 | SAMN05444391_0144 | SAMN05444391_0143 | Hypothetical protein. | Uncharacterized protein, contains GYD domain. | 0.789 |
SHK17027.1 | SHK17061.1 | SAMN05444391_0144 | SAMN05444391_0145 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.789 |
SHK17027.1 | proA | SAMN05444391_0144 | SAMN05444391_0141 | Hypothetical protein. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.446 |
SHK17061.1 | SHK16964.1 | SAMN05444391_0145 | SAMN05444391_0142 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Cytochrome c. | 0.588 |
SHK17061.1 | SHK16993.1 | SAMN05444391_0145 | SAMN05444391_0143 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Uncharacterized protein, contains GYD domain. | 0.789 |
SHK17061.1 | SHK17027.1 | SAMN05444391_0145 | SAMN05444391_0144 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Hypothetical protein. | 0.789 |
SHK17061.1 | proA | SAMN05444391_0145 | SAMN05444391_0141 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.525 |
SHK41741.1 | SHK16993.1 | SAMN05444391_0950 | SAMN05444391_0143 | Hypothetical protein. | Uncharacterized protein, contains GYD domain. | 0.431 |
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