STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK41914.1Pyruvate ferredoxin oxidoreductase gamma subunit. (227 aa)    
Predicted Functional Partners:
SHK38475.1
Pyruvate ferredoxin oxidoreductase beta subunit.
 
 0.999
SHK41856.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 
 0.999
SHK41886.1
Pyruvate ferredoxin oxidoreductase beta subunit.
 
 0.999
SHK38517.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 
 0.998
SHK41940.1
Pyruvate ferredoxin oxidoreductase delta subunit.
  
 
 0.988
SHK45889.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.978
SHK18852.1
citryl-CoA lyase.
   
 
 0.977
SHK14639.1
Pyruvate carboxylase subunit B.
   
 
 0.975
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
    
 0.965
SHK13668.1
Phosphoenolpyruvate synthase.
    
 0.958
Your Current Organism:
Thermocrinis minervae
NCBI taxonomy Id: 381751
Other names: Aquificaceae bacterium CR11, Aquificaceae sp. CR11, DSM 19557, T. minervae, Thermocrinis minervae Caldwell et al. 2010, strain CR11
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