STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_B09g098948Uncharacterized protein; Belongs to the GPN-loop GTPase family. (330 aa)    
Predicted Functional Partners:
Ahy_A02g005742
RTR1-type domain-containing protein.
    
 
 0.938
Ahy_B05g075597
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
 
 0.935
Ahy_A08g038851
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 
 0.878
Ahy_A07g033143
Uncharacterized protein.
    
 
 0.878
Ahy_A04g020182
RPOLD domain-containing protein.
   
 
 0.808
Ahy_B01g053513
Uncharacterized protein.
   
 
 0.808
Ahy_A01g002883
Uncharacterized protein.
   
 
 0.808
Ahy_B09g096217
RPOLD domain-containing protein.
   
 
 0.754
Ahy_B05g078181
RNA_pol_A_bac domain-containing protein.
   
 
 0.754
Ahy_B05g078184
RNA_pol_A_bac domain-containing protein.
   
 
 0.754
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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