STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_B09g100031Uncharacterized protein. (1069 aa)    
Predicted Functional Partners:
Ahy_A04g021487
Uncharacterized protein.
   
   0.892
Ahy_B06g085899
Uncharacterized protein.
  
  
 
0.861
Ahy_A02g007147
Uncharacterized protein.
  
  
 
0.861
Ahy_A06g030811
Uncharacterized protein.
  
  
 
0.860
Ahy_B03g062739
Uncharacterized protein.
   
 
 0.845
Ahy_A10g049464
Uncharacterized protein.
   
 
 0.845
Ahy_A03g011072
Uncharacterized protein.
   
 
 0.845
Ahy_B09g095733
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 
 0.826
Ahy_A09g045639
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 
 0.826
Ahy_B03g067536
Uncharacterized protein.
   
 
 0.809
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.