STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_B05g079446Pectate lyase. (384 aa)    
Predicted Functional Partners:
Ahy_A07g037384
Uncharacterized protein.
     
 0.900
Ahy_B06g085690
Uncharacterized protein.
     
 0.874
Ahy_A09g045217
Pectinesterase.
   
 
 0.870
Ahy_B06g080244
Uncharacterized protein.
     
 0.865
Ahy_A06g026753
Uncharacterized protein.
     
 0.865
Ahy_B06g080987
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
    
  0.864
Ahy_B10g106199
Uncharacterized protein.
     
 0.862
Ahy_A10g047069
Uncharacterized protein.
     
 0.862
Ahy_A03g014509
Pectinesterase.
   
 
 0.860
Ahy_A01g001767
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
   
 
  0.856
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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